外文文献—遗传算法.doc

附录I 英文翻译第一部分 英文原文文章来源：书名：自然赋予灵感的元启发示算法第二、三章出版社：英国Luniver出版社出版日期：2008Chapter 2Genetic Algorithms2.1 IntroductionThe genetic algorithm (GA), developed by John Holland and his collaborators in the 1960s and 1970s, is a model or abstraction of biological evolution based on Charles Darwins theory of natural selection. Holland was the first to use the crossover and recombination, mutation, and selection in the study of adaptive and artificial systems. These genetic operators form the essential part of the genetic algorithm as a problem-solving strategy. Since then, many variants of genetic algorithms have been developed and applied to a wide range of optimization problems, from graph colouring to pattern recognition, from discrete systems (such as the travelling salesman problem) to continuous systems (e.g., the efficient design of airfoil in aerospace engineering), and from financial market to multiobjective engineering optimization.There are many advantages of genetic algorithms over traditional optimization algorithms, and two most noticeable advantages are: the ability of dealing with complex problems and parallelism. Genetic algorithms can deal with various types of optimization whether the objective (fitness) functionis stationary or non-stationary (change with time), linear or nonlinear, continuous or discontinuous, or with random noise. As multiple offsprings in a population act like independent agents, the population (or any subgroup) can explore the search space in many directions simultaneously. This feature makes it ideal to parallelize the algorithms for implementation. Different parameters and even different groups of strings can be manipulated at the same time.However, genetic algorithms also have some disadvantages.The formulation of fitness function, the usage of population size, the choice of the important parameters such as the rate of mutation and crossover, and the selection criteria criterion of new population should be carefully carried out. Any inappropriate choice will make it difficult for the algorithm to converge, or it simply produces meaningless results.2.2 Genetic Algorithms2.2.1 Basic ProcedureThe essence of genetic algorithms involves the encoding of an optimization function as arrays of bits or character strings to represent the chromosomes, the manipulation operations of strings by genetic operators, and the selection according to their fitness in the aim to find a solution to the problem concerned. This is often done by the following procedure:1) encoding of the objectives or optimization functions; 2) defining a fitness function or selection criterion; 3) creating a population of individuals; 4) evolution cycle or iterations by evaluating the fitness of all the individuals in the population,creating a new population by performing crossover, and mutation,fitness-proportionate reproduction etc, and replacing the old population and iterating again using the new population;5) decoding the results to obtain the solution to the problem.These steps can schematically be represented as the pseudo code of genetic algorithms shown in Fig. 2.1. One iteration of creating a new population is called a generation. The fixed-length character strings are used in most of genetic algorithms during each generation although there is substantial research on the variable-length strings and coding structures.The coding of the objective function is usually in the form of binary arrays or real-valued arrays in the adaptive genetic algorithms. For simplicity, we use binary strings for encoding and decoding. The genetic operators include crossover,mutation, and selection from the population.The crossover of two parent strings is the main operator with a higher probability and is carried out by swapping one segment of one chromosome with the corresponding segment on another chromosome at a random position (see Fig.2.2). The crossover carried out in this way is a single-point crossover. Crossover at multiple points is also used in many genetic algorithms to increase the efficiency of the algorithms.The mutation operation is achieved by flopping the randomly selected bits (see Fig. 2.3), and the mutation probability is usually small. The selection of an individual in a population is carried out by the evaluation of its fitness, and it can remain in the new generation if a certain threshold of the fitness is reached or the reproduction of a population is fitness-proportionate. That is to say, the individuals with higher fitness are more likely to reproduce.2.2.2 Choice of ParametersAn important issue is the formulation or choice of an appropriate fitness function that determines the selection criterion in a particular problem. For the minimization of a function using genetic algorithms, one simple way of constructing a fitness function is to use the simplest form F = Ay with A being a large constant (though A = 0 will do) and y = f(x), thus the objective is to maximize the fitness function and subsequently minimize the objective function f(x). However, there are many different ways of defining a fitness function.For example, we can use the individual fitness assignment relative to the whole populationwhere is the phenotypic value of individual i, and N is the population size. The appropriate form of the fitness function will make sure that the solutions with higher fitness should be selected efficiently. Poor fitness function may result in incorrect or meaningless solutions. Another important issue is the choice of various parameters.The crossover probabilityis usually very high, typically in the range of 0.71.0. On the other hand, the mutation probability is usually small (usually 0.001 _ 0.05). If is too small, then the crossover occurs sparsely, which is not efficient for evolution. If the mutation probability is too high, the solutions could still jump around even if the optimal solution is approaching.The selection criterion is also important. How to select the current population so that the best individuals with higher fitness should be preserved and passed onto the next generation. That is often carried out in association with certain elitism. The basic elitism is to select the most fit individual (in each generation) which will be carried over to the new generation without being modified by genetic operators. This ensures that the best solution is achieved more quickly.Other issues include the multiple sites for mutation and the population size. The mutation at a single site is not very efficient, mutation at multiple sites will increase the evolution efficiency. However, too many mutants will make it difficult for the system to converge or even make the system go astray to the wrong solutions. In reality, if the mutation is too high under high selection pressure, then the whole population might go extinct.In addition, the choice of the right population size is also very important. If the population size is too small, there is not enough evolution going on, and there is a risk for the whole population to go extinct. In the real world, a species with a small population, ecological theory suggests that there is a real danger of extinction for such species. Even the system carries on, there is still a danger of premature convergence. In a small population, if a significantly more fit individual appears too early, it may reproduces enough offsprings so that they overwhelm the whole (small) population. This will eventually drive the system to a local optimum (not the global optimum). On the other hand, if the population is too large, more evaluations of the objective function are needed, which will require extensive computing time.Furthermore, more complex and adaptive genetic algorithms are under active research and the literature is vast about these topics.2.3 ImplementationUsing the basic procedure described in the above section, we can implement the genetic algorithms in any programming language. For simplicity of demonstrating how it works, we have implemented a function optimization using a simple GA in both Matlab and Octave.For the generalized De Jongs test function where is a positive integer and r > 0 is the half length of the domain. This function has a minimum of at . For the values of , r = 100 and n = 5 as well as a population size of 40 16-bit strings, the variations of the objective function during a typical run are shown in Fig. 2.4. Any two runs will give slightly different results due to the stochastic nature of genetic algorithms, but better estimates are obtained as the number of generations increases. For the well-known Easom functionit has a global maximum at (see Fig. 2.5). Now we can use the following Matlab/Octave to find its global maximum. In our implementation, we have used fixed length 16-bit strings. The probabilities of crossover and mutation are respectivelyAs it is a maximization problem, we can use the simplest fitness function F = f(x).The outputs from a typical run are shown in Fig. 2.6 where the top figure shows the variations of the best estimates as they approach while the lower figure shows the variations of the fitness function.% Genetic Algorithm (Simple Demo) Matlab/Octave Program% Written by X S Yang (Cambridge University)% Usage: gasimple or gasimple(x*exp(-x);function bestsol, bestfun,count=gasimple(funstr)global solnew sol pop popnew fitness fitold f range;if nargin<1,% Easom Function with fmax=1 at x=pifunstr=-cos(x)*exp(-(x-3.1415926)2);endrange=-10 10; % Range/Domain% Converting to an inline functionf=vectorize(inline(funstr);% Generating the initil populationrand(state,0); % Reset the random generatorpopsize=20; % Population sizeMaxGen=100; % Max number of generationscount=0; % counternsite=2; % number of mutation sitespc=0.95; % Crossover probabilitypm=0.05; % Mutation probabilitynsbit=16; % String length (bits)% Generating initial populationpopnew=init_gen(popsize,nsbit);fitness=zeros(1,popsize); % fitness array% Display the shape of the functionx=range(1):0.1:range(2); plot(x,f(x);% Initialize solution <- initial populationfor i=1:popsize,solnew(i)=bintodec(popnew(i,:);end% Start the evolution loopfor i=1:MaxGen,% Record as the historyfitold=fitness; pop=popnew; sol=solnew;for j=1:popsize,% Crossover pairii=floor(popsize*rand)+1; jj=floor(popsize*rand)+1;% Cross overif pc>rand,popnew(ii,:),popnew(jj,:)=.crossover(pop(ii,:),pop(jj,:);% Evaluate the new pairscount=count+2;evolve(ii); evolve(jj);end% Mutation at n sitesif pm>rand,kk=floor(popsize*rand)+1; count=count+1;popnew(kk,:)=mutate(pop(kk,:),nsite);evolve(kk);endend % end for j% Record the current bestbestfun(i)=max(fitness);bestsol(i)=mean(sol(bestfun(i)=fitness);end% Display resultssubplot(2,1,1); plot(bestsol); title(Best estimates);subplot(2,1,2); plot(bestfun); title(Fitness);% - All sub functions -% generation of initial populationfunction pop=init_gen(np,nsbit)% String length=nsbit+1 with pop(:,1) for the Signpop=rand(np,nsbit+1)>0.5;% Evolving the new generationfunction evolve(j)global solnew popnew fitness fitold pop sol f;solnew(j)=bintodec(popnew(j,:);fitness(j)=f(solnew(j);if fitness(j)>fitold(j),pop(j,:)=popnew(j,:);sol(j)=solnew(j);end% Convert a binary string into a decimal numberfunction dec=bintodec(bin)global range;% Length of the string without signnn=length(bin)-1;num=bin(2:end); % get the binary% Sign=+1 if bin(1)=0; Sign=-1 if bin(1)=1.Sign=1-2*bin(1);dec=0;% floating point.decimal place in the binarydp=floor(log2(max(abs(range);for i=1:nn,dec=dec+num(i)*2(dp-i);enddec=dec*Sign;% Crossover operatorfunction c,d=crossover(a,b)nn=length(a)-1;% generating random crossover pointcpoint=floor(nn*rand)+1;c=a(1:cpoint) b(cpoint+1:end);d=b(1:cpoint) a(cpoint+1:end);% Mutatation operatorfunction anew=mutate(a,nsite)nn=length(a); anew=a;for i=1:nsite,j=floor(rand*nn)+1;anew(j)=mod(a(j)+1,2);endThe above Matlab program can easily be extended to higher dimensions. In fact, there is no need to do any programming (if you prefer) because there are many software packages (either freeware or commercial) about genetic algorithms. For example, Matlab itself has an extra optimization toolbox.Biology-inspired algorithms have many advantages over traditional optimization methods such as the steepest descent and hill-climbing and calculus-based techniques due to the parallelism and the ability of locating the very good approximate solutions in extremely very large search spaces.Furthermore, more powerful new generation algorithms can be formulated by combining existing and new evolutionary algorithms with classical optimization methods.Chapter 3Ant AlgorithmsFrom the discussion of genetic algorithms, we know that we can improve the search efficiency by using randomness which will also increase the diversity of the solutions so as to avoid being trapped in local optima. The selection of the best individuals is also equivalent to use memory. In fact, there are other forms of selection such as using chemical messenger (pheromone) which is commonly used by ants, honey bees, and many other insects. In this chapter, we will discuss the nature-inspired ant colony optimization (ACO), which is a metaheuristic method.3.1 Behaviour of AntsAnts are social insects in habit and they live together in organized colonies whose population size can range from about 2 to 25 millions. When foraging, a swarm of ants or mobile agents interact or communicate in their local environment. Each ant can lay scent chemicals or pheromone so as to communicate with others, and each ant is also able to follow the route marked with pheromone laid by other ants. When ants find a food source, they will mark it with pheromone and also mark the trails to and from it. From the initial random foraging route, the pheromone concentration varies and the ants follow the route with higher pheromone concentration, and the pheromone is enhanced by the increasing number of ants. As more and more ants follow the same route, it becomes the favoured path. Thus, some favourite routes (often the shortest or more efficient) emerge. This is actually a positive feedback mechanism. Emerging behaviour exists in an ant colony and such emergence arises from simple interactions among individual ants. Individual ants act according to simple and local information (such as pheromone concentration) to carry out their activities. Although there is no master ant overseeing the